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Slin_6025 protein (Spirosoma linguale) - STRING interaction network
"Slin_6025" - PpiC-type peptidyl-prolyl cis-trans isomerase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6025PpiC-type peptidyl-prolyl cis-trans isomerase (706 aa)    
Predicted Functional Partners:
Slin_3080
Hypothetical protein (1564 aa)
   
          0.734
Slin_5634
Hypothetical protein (231 aa)
   
          0.708
Slin_6077
PpiC-type peptidyl-prolyl cis-trans isomerase (133 aa)
   
          0.704
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (261 aa)
   
          0.684
Slin_0989
Hypothetical protein (188 aa)
 
          0.607
Slin_2013
Hypothetical protein (597 aa)
   
          0.598
Slin_4903
Organic solvent tolerance protein OstA-like protein (1210 aa)
   
          0.596
Slin_2001
Hypothetical protein (500 aa)
   
          0.588
Slin_2039
Hypothetical protein (558 aa)
   
          0.586
Slin_5161
Hypothetical protein (428 aa)
   
          0.577
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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