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Slin_6048 protein (Spirosoma linguale) - STRING interaction network
"Slin_6048" - Alpha,alpha-trehalase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6048Alpha,alpha-trehalase (503 aa)    
Predicted Functional Partners:
Slin_4792
Trehalose-phosphatase (738 aa)
   
 
  0.992
Slin_4447
Aldose 1-epimerase (290 aa)
     
 
    0.901
Slin_3046
Aldose 1-epimerase (345 aa)
     
 
    0.901
Slin_2977
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (397 aa)
     
 
    0.901
Slin_1235
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (387 aa)
     
 
    0.901
pgi
Glucose-6-phosphate isomerase (552 aa)
     
   
  0.564
Slin_6049
Hypothetical protein (250 aa)
              0.546
Slin_5151
Heat shock protein Hsp20 (148 aa)
     
      0.544
Slin_0370
Heat shock protein Hsp20 (140 aa)
     
      0.544
Slin_4739
UDP-N-acetylmuramyl tripeptide synthetase (498 aa)
     
      0.469
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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