STRINGSTRING
Slin_6067 protein (Spirosoma linguale) - STRING interaction network
"Slin_6067" - Demethylmenaquinone methyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6067Demethylmenaquinone methyltransferase (311 aa)    
Predicted Functional Partners:
Slin_3969
Amidohydrolase (427 aa)
 
          0.837
Slin_3965
Amidohydrolase (414 aa)
 
          0.836
Slin_3968
L-seryl-tRNA(ser) selenium transferase protein (406 aa)
 
          0.784
Slin_3964
Pyridoxal phosphate-dependent enzyme (407 aa)
 
          0.784
Slin_6070
Galactonate dehydratase (474 aa)
 
          0.697
Slin_2473
RagB/SusD domain-containing protein (615 aa)
   
          0.678
Slin_2475
RagB/SusD domain-containing protein (623 aa)
   
          0.672
Slin_2474
TonB-dependent receptor plug (1095 aa)
   
          0.665
Slin_2476
TonB-dependent receptor plug (1095 aa)
   
          0.663
Slin_6068
Demethylmenaquinone methyltransferase (312 aa)
 
       
0.644
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]