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Slin_6070 protein (Spirosoma linguale) - STRING interaction network
"Slin_6070" - Galactonate dehydratase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6070Galactonate dehydratase (474 aa)    
Predicted Functional Partners:
Slin_3954
2-keto-3-deoxy-galactonokinase (334 aa)
 
 
  0.960
Slin_6068
Demethylmenaquinone methyltransferase (312 aa)
 
          0.792
Slin_0611
Muconate lactonizing mandelate racemase protein (377 aa)
   
          0.777
Slin_6067
Demethylmenaquinone methyltransferase (311 aa)
 
          0.697
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.681
Slin_1535
3-oxoadipate enol-lactonase (373 aa)
   
   
  0.667
Slin_1934
Muconate lactonizing mandelate racemase protein (355 aa)
 
          0.625
Slin_6069
Hypothetical protein (43 aa)
              0.621
Slin_3955
2-dehydro-3-deoxyphosphogluconate aldolase (215 aa)
 
          0.575
Slin_6192
Demethylmenaquinone methyltransferase-like protein (314 aa)
 
          0.554
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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