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Slin_6077 protein (Spirosoma linguale) - STRING interaction network
"Slin_6077" - PpiC-type peptidyl-prolyl cis-trans isomerase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6077PpiC-type peptidyl-prolyl cis-trans isomerase (133 aa)    
Predicted Functional Partners:
Slin_6025
PpiC-type peptidyl-prolyl cis-trans isomerase (706 aa)
   
          0.704
Slin_5169
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (1029 aa)
   
   
  0.608
Slin_6076
Hypothetical protein (113 aa)
              0.589
Slin_4434
Outer membrane protein assembly complex, YaeT protein (865 aa)
   
 
  0.578
Slin_6522
Peptidyl-prolyl isomerase (258 aa)
     
 
  0.567
Slin_1193
Inosine-5’-monophosphate dehydrogenase (490 aa)
     
 
  0.561
Slin_4049
Histidine triad (HIT) protein (289 aa)
   
 
  0.550
Slin_1055
Histidine triad (HIT) protein (130 aa)
   
 
  0.550
Slin_5123
Pyrrolo-quinoline quinone (475 aa)
     
 
  0.525
Slin_5982
Histone family protein DNA-binding protein (100 aa)
 
     
  0.494
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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