STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6081PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein; Belongs to the glycosyl hydrolase 43 family. (480 aa)    
Predicted Functional Partners:
Slin_6082
Hypothetical protein.
       0.678
Slin_3266
KEGG: ccs:CCNA_01036 hypothetical protein.
  
     0.585
Slin_4946
Hypothetical protein; KEGG: MUC5B; mucin 5B, oligomeric mucus/gel-forming.
  
     0.583
Slin_1237
PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: cak:Caul_3612 alpha-N-arabinofuranosidase.
 
  
 0.529
Slin_5108
KEGG: hch:HCH_03033 hypothetical protein.
  
     0.510
Slin_5723
PFAM: regulatory protein TetR; KEGG: bja:blr0601 transcriptional regulatory protein.
  
     0.496
Slin_1422
PFAM: protein of unknown function DUF1680; KEGG: sde:Sde_0778 acetyl-CoA carboxylase, biotin carboxylase.
 
     0.487
Slin_1231
Lysophospholipase L1 and related esterase-like protein; KEGG: hypothetical protein.
 
     0.482
Slin_4026
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mll1734 hypothetical protein.
  
     0.473
Slin_1069
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
     0.436
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.