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Slin_6090 protein (Spirosoma linguale) - STRING interaction network
"Slin_6090" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6090Hypothetical protein (398 aa)    
Predicted Functional Partners:
Slin_2856
Phosphomannomutase (468 aa)
 
   
  0.829
Slin_6089
DNA polymerase III gamma/tau subunits-like protein (371 aa)
              0.808
Slin_4813
dTDP-4-dehydrorhamnose 3,5-epimerase (173 aa)
   
 
  0.712
Slin_0434
dTDP-4-dehydrorhamnose 3,5-epimerase (181 aa)
   
 
  0.712
Slin_4464
Glucosamine/fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (612 aa)
 
   
  0.687
Slin_2658
Glucosamine/fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (612 aa)
 
   
  0.687
Slin_5684
Epimerase (276 aa)
 
   
  0.652
Slin_6091
Hypothetical protein (354 aa)
              0.642
Slin_4927
Family 2 glycosyl transferase (309 aa)
 
 
  0.629
Slin_1139
Peptidase M42 family protein (356 aa)
 
          0.622
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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