STRINGSTRING
Slin_6100 protein (Spirosoma linguale) - STRING interaction network
"Slin_6100" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6100Hypothetical protein (398 aa)    
Predicted Functional Partners:
Slin_6101
Methyltransferase (325 aa)
   
  0.993
Slin_6289
Sulfatase (486 aa)
     
  0.924
Slin_6052
Sulfatase (453 aa)
     
  0.924
Slin_6288
Sulfatase (523 aa)
     
    0.924
Slin_5375
Sulfatase (560 aa)
     
    0.924
Slin_5003
Sulfatase (533 aa)
     
    0.924
Slin_4996
Sulfatase (506 aa)
     
    0.924
Slin_4261
Sulfatase (506 aa)
     
    0.924
Slin_4179
Sulfatase (514 aa)
     
    0.924
Slin_3375
Sulfatase (571 aa)
     
    0.924
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (7%) [HD]