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Slin_6135 protein (Spirosoma linguale) - STRING interaction network
"Slin_6135" - Bilirubin oxidase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6135Bilirubin oxidase (538 aa)    
Predicted Functional Partners:
Slin_6136
Hypothetical protein (178 aa)
              0.856
Slin_6134
Hypothetical protein (187 aa)
              0.767
purE
Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) (160 aa)
 
 
        0.688
tatC
Sec-independent protein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes (285 aa)
       
 
  0.625
Slin_6137
Blue (type 1) copper domain-containing protein (669 aa)
              0.590
Slin_3569
ATPase P (804 aa)
   
 
  0.569
Slin_2925
ATPase P (767 aa)
   
 
  0.569
Slin_2319
Glutamate synthase (1524 aa)
       
 
  0.516
Slin_6138
Export-related chaperone CsaA (112 aa)
              0.479
Slin_6133
Peptidase M28 (461 aa)
              0.473
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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