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Slin_6169 protein (Spirosoma linguale) - STRING interaction network
"Slin_6169" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6169Hypothetical protein (392 aa)    
Predicted Functional Partners:
Slin_6170
Hypothetical protein (142 aa)
 
          0.972
Slin_5616
Hypothetical protein (451 aa)
   
          0.593
Slin_6149
Peptidase S41 (513 aa)
   
          0.512
Slin_4987
Hypothetical protein (296 aa)
   
          0.506
Slin_2270
Hypothetical protein (464 aa)
   
          0.500
Slin_3372
Hypothetical protein (455 aa)
   
          0.473
Slin_1716
Hypothetical protein (514 aa)
   
          0.469
Slin_3400
TonB-dependent receptor plug (1057 aa)
   
          0.448
Slin_0594
Hypothetical protein (1053 aa)
   
          0.435
Slin_2364
Thioredoxin (465 aa)
   
          0.429
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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