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Slin_6175 protein (Spirosoma linguale) - STRING interaction network
"Slin_6175" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6175Hypothetical protein (277 aa)    
Predicted Functional Partners:
Slin_6177
Beta-lactamase (470 aa)
 
     
  0.899
Slin_5172
Beta-lactamase (466 aa)
 
     
  0.851
Slin_6174
Crp/Fnr family transcriptional regulator (212 aa)
 
        0.828
Slin_6176
Hypothetical protein (71 aa)
              0.573
Slin_2684
Rhodanese (101 aa)
 
     
  0.551
lgt
Prolipoprotein diacylglyceryl transferase; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (281 aa)
 
        0.482
Slin_1136
TonB-dependent receptor (998 aa)
   
          0.480
Slin_6634
Nematoblast specific protein (434 aa)
   
          0.463
Slin_1183
Hypothetical protein (236 aa)
   
          0.455
Slin_4697
Rhodanese (184 aa)
 
     
  0.447
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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