STRINGSTRING
Slin_6177 protein (Spirosoma linguale) - STRING interaction network
"Slin_6177" - Beta-lactamase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6177Beta-lactamase (470 aa)    
Predicted Functional Partners:
Slin_5941
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (526 aa)
   
 
  0.981
Slin_4680
Cysteine desulfurase (372 aa)
   
  0.951
Slin_4051
Cysteine desulfurase (380 aa)
   
  0.951
Slin_1497
Cysteine desulfurase (389 aa)
   
  0.951
Slin_6175
Hypothetical protein (277 aa)
 
     
  0.899
Slin_5171
Hypothetical protein (265 aa)
 
     
  0.865
Slin_6576
UBA/THIF-type NAD/FAD binding protein (348 aa)
   
 
  0.823
Slin_3463
UBA/THIF-type NAD/FAD binding protein (379 aa)
   
 
  0.823
Slin_0543
DNA polymerase I (1024 aa)
   
   
  0.690
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (545 aa)
   
 
  0.662
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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