STRINGSTRING
Slin_6182 protein (Spirosoma linguale) - STRING interaction network
"Slin_6182" - Phosphoribosyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6182Phosphoribosyltransferase (170 aa)    
Predicted Functional Partners:
Slin_0435
Orotidine 5’-phosphate decarboxylase (279 aa)
   
 
  0.945
pyrB
Aspartate carbamoyltransferase (307 aa)
 
 
  0.941
Slin_2388
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (244 aa)
         
  0.904
cmk
Cytidylate kinase (233 aa)
       
  0.901
Slin_5742
Cytosine deaminase (144 aa)
       
    0.900
Slin_5585
5’-nucleotidase (340 aa)
         
    0.900
Slin_5127
Phosphoribulokinase/uridine kinase (205 aa)
         
    0.900
Slin_3943
Purine nucleoside phosphorylase I; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate (271 aa)
         
    0.900
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (258 aa)
         
    0.900
Slin_6624
Dihydroorotase (434 aa)
 
 
  0.890
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]