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Slin_6188 protein (Spirosoma linguale) - STRING interaction network
"Slin_6188" - TonB family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6188TonB family protein (804 aa)    
Predicted Functional Partners:
Slin_6189
CopY family transcriptional regulator (123 aa)
 
          0.915
Slin_6187
TonB family protein (472 aa)
 
       
0.892
Slin_5605
Hypothetical protein (361 aa)
   
          0.730
Slin_5968
CopY family transcriptional regulator (119 aa)
 
          0.710
Slin_3031
TonB-dependent receptor plug (1022 aa)
   
          0.710
Slin_3301
Hypothetical protein (586 aa)
   
          0.707
Slin_2385
Hypothetical protein (901 aa)
   
          0.702
Slin_4221
RagB/SusD domain-containing protein (457 aa)
   
          0.694
Slin_5164
TonB-dependent receptor (813 aa)
   
          0.689
Slin_4550
TonB-dependent receptor plug (1192 aa)
   
          0.686
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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