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Slin_6191 protein (Spirosoma linguale) - STRING interaction network
"Slin_6191" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6191Hypothetical protein (855 aa)    
Predicted Functional Partners:
Slin_6190
Glycoside hydrolase family protein (640 aa)
 
          0.801
Slin_2035
Hypothetical protein (678 aa)
 
          0.782
Slin_2384
Glycoside hydrolase family protein (330 aa)
   
          0.768
Slin_3360
Glycoside hydrolase family protein (522 aa)
 
          0.666
Slin_1843
Oxidoreductase domain-containing protein (447 aa)
   
          0.666
Slin_4320
Glycoside hydrolase family protein (330 aa)
   
          0.632
Slin_1842
Xylose isomerase (287 aa)
   
          0.630
Slin_2648
ADP-ribosylation/crystallin J1 (543 aa)
   
          0.623
Slin_3919
Glycosidase PH1107-like protein (364 aa)
   
          0.612
Slin_0438
Hypothetical protein (247 aa)
   
          0.581
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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