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Slin_6193 protein (Spirosoma linguale) - STRING interaction network
"Slin_6193" - Muconate lactonizing mandelate racemase protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6193Muconate lactonizing mandelate racemase protein (425 aa)    
Predicted Functional Partners:
Slin_3954
2-keto-3-deoxy-galactonokinase (334 aa)
 
 
  0.960
Slin_3949
Muconate lactonizing mandelate racemase protein (388 aa)
   
   
 
0.840
Slin_6192
Demethylmenaquinone methyltransferase-like protein (314 aa)
 
          0.773
Slin_1934
Muconate lactonizing mandelate racemase protein (355 aa)
 
          0.751
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.681
Slin_1535
3-oxoadipate enol-lactonase (373 aa)
   
   
  0.667
Slin_3955
2-dehydro-3-deoxyphosphogluconate aldolase (215 aa)
 
          0.567
Slin_5194
Beta-lactamase (323 aa)
 
          0.546
Slin_6349
Muconate lactonizing mandelate racemase protein (340 aa)
 
          0.540
Slin_1553
AMP-dependent synthetase and ligase (495 aa)
 
   
  0.540
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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