STRINGSTRING
Slin_6200 protein (Spirosoma linguale) - STRING interaction network
"Slin_6200" - Type I phosphodiesterase/nucleotide pyrophosphatase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6200Type I phosphodiesterase/nucleotide pyrophosphatase (413 aa)    
Predicted Functional Partners:
Slin_1872
Hypothetical protein (401 aa)
   
          0.696
Slin_6192
Demethylmenaquinone methyltransferase-like protein (314 aa)
 
          0.686
Slin_3831
Ethyl tert-butyl ether degradation EthD (113 aa)
   
          0.625
Slin_0965
Heme-binding protein (902 aa)
   
          0.619
Slin_6068
Demethylmenaquinone methyltransferase (312 aa)
   
          0.613
Slin_1875
Hypothetical protein (147 aa)
   
          0.613
Slin_0957
Hypothetical protein (785 aa)
   
          0.608
Slin_0966
Hypothetical protein (259 aa)
   
          0.601
Slin_6199
N-acetyltransferase GCN5 (173 aa)
              0.599
Slin_5004
Hypothetical protein (1010 aa)
   
          0.595
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (6%) [HD]