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Slin_6207 protein (Spirosoma linguale) - STRING interaction network
"Slin_6207" - Oxidoreductase domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6207Oxidoreductase domain-containing protein (476 aa)    
Predicted Functional Partners:
Slin_0438
Hypothetical protein (247 aa)
 
          0.836
Slin_6569
Hypothetical protein (238 aa)
 
          0.835
Slin_3462
Hypothetical protein (261 aa)
 
          0.796
Slin_4651
Hypothetical protein (226 aa)
   
          0.777
Slin_3047
Hypothetical protein (242 aa)
   
          0.777
Slin_5725
Hypothetical protein (198 aa)
 
          0.738
Slin_0639
Hypothetical protein (231 aa)
   
          0.699
Slin_5067
Oxidoreductase domain-containing protein (452 aa)
 
          0.697
Slin_6337
Hypothetical protein (218 aa)
   
          0.686
Slin_0088
Xylose isomerase (341 aa)
 
          0.663
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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