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Slin_6216 protein (Spirosoma linguale) - STRING interaction network
"Slin_6216" - 40-residue YVTN family beta-propeller repeat-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_621640-residue YVTN family beta-propeller repeat-containing protein (911 aa)    
Predicted Functional Partners:
Slin_6377
Hypothetical protein (340 aa)
   
          0.763
Slin_6292
PA14 domain-containing protein (1314 aa)
   
          0.685
Slin_6571
Ig family protein (1342 aa)
   
          0.617
Slin_6217
40-residue YVTN family beta-propeller repeat-containing protein (829 aa)
 
       
0.615
Slin_2597
UTP--glucose-1-phosphate uridylyltransferase (1119 aa)
   
          0.604
Slin_6290
Ricin B lectin (1259 aa)
   
          0.563
Slin_6215
Oxidoreductase domain-containing protein (440 aa)
              0.561
Slin_5108
Hypothetical protein (387 aa)
   
          0.507
Slin_0205
Hypothetical protein (489 aa)
   
          0.502
Slin_1716
Hypothetical protein (514 aa)
   
          0.498
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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