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Slin_6227 protein (Spirosoma linguale) - STRING interaction network
"Slin_6227" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6227Hypothetical protein (420 aa)    
Predicted Functional Partners:
Slin_6228
RagB/SusD domain-containing protein (511 aa)
 
          0.871
Slin_6229
TonB-dependent receptor plug (1137 aa)
 
          0.759
Slin_3831
Ethyl tert-butyl ether degradation EthD (113 aa)
   
          0.752
Slin_6292
PA14 domain-containing protein (1314 aa)
   
          0.743
Slin_6571
Ig family protein (1342 aa)
   
          0.735
Slin_6290
Ricin B lectin (1259 aa)
   
          0.687
Slin_1953
Integrase family protein (405 aa)
   
          0.672
Slin_6432
RagB/SusD domain-containing protein (542 aa)
   
          0.664
Slin_1312
Hypothetical protein (169 aa)
   
          0.660
Slin_1976
Conjugative relaxase domain-containing protein (919 aa)
   
          0.630
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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