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Slin_6246 protein (Spirosoma linguale) - STRING interaction network
"Slin_6246" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6246Hypothetical protein (512 aa)    
Predicted Functional Partners:
Slin_1424
RagB/SusD domain-containing protein (604 aa)
   
          0.699
Slin_0735
Xylose isomerase (312 aa)
   
          0.680
Slin_4772
Hypothetical protein (628 aa)
   
          0.674
Slin_0274
TonB-dependent receptor (1083 aa)
   
          0.632
Slin_2785
4-amino-4-deoxy-L-arabinose transferase-like protein (502 aa)
   
          0.595
Slin_0277
TonB-dependent receptor plug (1096 aa)
   
          0.579
Slin_0273
RagB/SusD domain-containing protein (582 aa)
   
          0.579
Slin_0440
RagB/SusD domain-containing protein (561 aa)
   
          0.563
Slin_0511
Dehydrogenase (1265 aa)
   
          0.562
Slin_6252
Heme-binding protein (874 aa)
   
          0.558
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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