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Slin_6271 protein (Spirosoma linguale) - STRING interaction network
"Slin_6271" - Heme NO binding domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6271Heme NO binding domain-containing protein (179 aa)    
Predicted Functional Partners:
Slin_6269
LytTR family transcriptional regulator (228 aa)
              0.880
Slin_6270
Multi-sensor hybrid histidine kinase (952 aa)
              0.859
Slin_2437
Hypothetical protein (178 aa)
   
          0.631
Slin_2511
YHS domain-containing protein (150 aa)
   
          0.577
Slin_2513
Hypothetical protein (158 aa)
   
          0.560
Slin_2517
YHS domain-containing protein (181 aa)
   
          0.535
Slin_6268
Nitric oxide synthase NOS (1524 aa)
              0.447
Slin_3336
Hypothetical protein (360 aa)
   
          0.411
Slin_5813
Isoamylase N-terminal domain-containing protein (100 aa)
   
          0.401
Slin_5230
PKD domain-containing protein (1222 aa)
   
          0.400
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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