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Slin_6275 protein (Spirosoma linguale) - STRING interaction network
"Slin_6275" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6275Hypothetical protein (281 aa)    
Predicted Functional Partners:
Slin_1593
Twin-arginine translocation pathway signal (336 aa)
   
          0.773
Slin_6276
Hypothetical protein (411 aa)
              0.709
Slin_6274
Short-chain dehydrogenase/reductase SDR (279 aa)
   
        0.623
Slin_1236
Class II aldolase/adducin family protein (233 aa)
 
          0.586
Slin_2703
Hypothetical protein (708 aa)
     
      0.565
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) (223 aa)
 
 
      0.496
Slin_0669
Tex-like protein (713 aa)
       
      0.471
Slin_6273
Hypothetical protein (188 aa)
              0.426
Slin_5473
Glutamine amidotransferase (188 aa)
   
        0.408
Slin_0655
Glutamine amidotransferase (205 aa)
   
        0.408
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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