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Slin_6288 protein (Spirosoma linguale) - STRING interaction network
"Slin_6288" - Sulfatase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6288Sulfatase (523 aa)    
Predicted Functional Partners:
Slin_1433
Hypothetical protein (358 aa)
 
 
    0.975
Slin_3225
Hypothetical protein (377 aa)
 
 
    0.949
Slin_4405
Hypothetical protein (334 aa)
 
 
    0.948
Slin_3063
Hypothetical protein (288 aa)
 
 
    0.946
Slin_1864
Hypothetical protein (668 aa)
 
 
    0.940
Slin_6100
Hypothetical protein (398 aa)
     
    0.924
Slin_0901
Radical SAM protein (414 aa)
 
   
  0.769
Slin_6289
Sulfatase (486 aa)
 
     
0.661
Slin_6287
RagB/SusD domain-containing protein (531 aa)
 
          0.614
Slin_6383
Thioredoxin (101 aa)
       
    0.519
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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