STRINGSTRING
Slin_6289 protein (Spirosoma linguale) - STRING interaction network
"Slin_6289" - Sulfatase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6289Sulfatase (486 aa)    
Predicted Functional Partners:
Slin_1433
Hypothetical protein (358 aa)
 
 
    0.976
Slin_3225
Hypothetical protein (377 aa)
 
 
    0.949
Slin_3063
Hypothetical protein (288 aa)
 
 
    0.949
Slin_4405
Hypothetical protein (334 aa)
 
 
    0.944
Slin_1864
Hypothetical protein (668 aa)
 
 
    0.944
Slin_6100
Hypothetical protein (398 aa)
     
  0.924
Slin_2629
Glycosyl hydrolase (397 aa)
       
  0.911
Slin_1907
Glycoside hydrolase family protein (730 aa)
         
    0.900
Slin_3375
Sulfatase (571 aa)
 
   
0.856
Slin_5003
Sulfatase (533 aa)
 
   
0.852
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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