STRINGSTRING
Slin_6301 protein (Spirosoma linguale) - STRING interaction network
"Slin_6301" - Group 1 glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6301Group 1 glycosyl transferase (428 aa)    
Predicted Functional Partners:
Slin_6297
Group 1 glycosyl transferase (400 aa)
 
          0.888
Slin_6299
Group 1 glycosyl transferase (385 aa)
 
          0.845
Slin_4073
Group 1 glycosyl transferase (377 aa)
 
          0.802
Slin_2586
Group 1 glycosyl transferase (384 aa)
 
          0.766
Slin_6302
Family 2 glycosyl transferase (312 aa)
 
          0.749
Slin_6300
Hypothetical protein (434 aa)
              0.725
Slin_4365
Group 1 glycosyl transferase (422 aa)
 
          0.677
Slin_6402
Group 1 glycosyl transferase (401 aa)
   
          0.661
Slin_6296
Transferase (184 aa)
 
          0.650
Slin_4368
Group 1 glycosyl transferase (420 aa)
 
          0.634
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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