STRINGSTRING
Slin_6303 protein (Spirosoma linguale) - STRING interaction network
"Slin_6303" - Acyltransferase 3 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6303Acyltransferase 3 (389 aa)    
Predicted Functional Partners:
Slin_6302
Family 2 glycosyl transferase (312 aa)
              0.679
Slin_6631
Fatty acid desaturase (361 aa)
   
          0.563
Slin_4544
Hypothetical protein (372 aa)
   
          0.549
Slin_6304
Group 1 glycosyl transferase (344 aa)
              0.540
Slin_6301
Group 1 glycosyl transferase (428 aa)
              0.533
Slin_6305
Hypothetical protein (433 aa)
              0.521
Slin_3146
Group 1 glycosyl transferase (382 aa)
   
          0.433
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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