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Slin_6317 protein (Spirosoma linguale) - STRING interaction network
"Slin_6317" - Fumarylacetoacetase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6317Fumarylacetoacetase (390 aa)    
Predicted Functional Partners:
Slin_6320
4-hydroxyphenylpyruvate dioxygenase (377 aa)
 
   
  0.933
Slin_6321
Homogentisate 12-dioxygenase (396 aa)
 
   
  0.921
fumC
Class II fumarate hydratase (466 aa)
     
    0.829
Slin_5010
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit (645 aa)
   
 
    0.822
Slin_6318
MarR family transcriptional regulator (145 aa)
              0.815
Slin_5009
Succinate dehydrogenase and fumarate reductase iron-sulfur protein (252 aa)
   
 
    0.810
Slin_5011
Succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family (231 aa)
         
    0.800
Slin_6314
Flavin reductase (294 aa)
         
  0.726
Slin_6319
Phenylalanine-4-hydroxylase (261 aa)
   
   
  0.620
Slin_6316
Hypothetical protein (160 aa)
              0.602
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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