STRINGSTRING
coaE protein (Spirosoma linguale) - STRING interaction network
"coaE" - dephospho-CoA kinase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coaEdephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (203 aa)    
Predicted Functional Partners:
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (157 aa)
   
 
  0.937
Slin_6327
Preprotein translocase subunit YajC (108 aa)
 
          0.770
Slin_1305
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (412 aa)
 
  0.749
Slin_6328
Hypothetical protein (150 aa)
              0.725
Slin_6326
Hypothetical protein (230 aa)
              0.724
Slin_0543
DNA polymerase I (1024 aa)
   
   
  0.721
Slin_6324
Amidase (555 aa)
   
        0.695
Slin_6330
NusB antitermination factor; Involved in the transcription termination process (378 aa)
         
  0.610
Slin_5942
Exonuclease RNase T and DNA polymerase III (270 aa)
 
        0.588
Slin_5592
DNA-formamidopyrimidine glycosylase (271 aa)
   
   
  0.531
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]