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Slin_6350 protein (Spirosoma linguale) - STRING interaction network
"Slin_6350" - Class I and II aminotransferase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6350Class I and II aminotransferase (360 aa)    
Predicted Functional Partners:
Slin_6349
Muconate lactonizing mandelate racemase protein (340 aa)
              0.871
Slin_5888
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (423 aa)
 
   
  0.712
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism (330 aa)
   
   
  0.605
purQ
Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in [...] (228 aa)
         
  0.603
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
 
  0.548
Slin_1535
3-oxoadipate enol-lactonase (373 aa)
   
 
  0.539
Slin_5891
Hypothetical protein (350 aa)
   
 
  0.531
Slin_5471
Alpha/beta hydrolase fold protein (255 aa)
   
 
  0.531
Slin_3872
Alpha/beta hydrolase (301 aa)
   
 
  0.531
Slin_3601
Alpha/beta hydrolase fold protein (264 aa)
   
 
  0.531
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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