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Slin_6362 protein (Spirosoma linguale) - STRING interaction network
"Slin_6362" - LacI family transcriptional regulator in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6362LacI family transcriptional regulator (349 aa)    
Predicted Functional Partners:
Slin_2649
Ribokinase (319 aa)
   
  0.728
Slin_1048
Inner-membrane translocator (328 aa)
 
   
  0.643
Slin_0841
DeoR family transcriptional regulator (249 aa)
   
     
  0.637
Slin_1049
ABC transporter (496 aa)
 
   
  0.629
Slin_1047
Periplasmic binding protein/LacI transcriptional regulator (317 aa)
 
   
  0.591
Slin_1088
PfkB domain-containing protein (315 aa)
 
   
  0.573
Slin_3183
PfkB domain-containing protein (297 aa)
 
   
  0.566
Slin_0739
DeoR family transcriptional regulator (250 aa)
   
     
  0.558
Slin_4421
acetoacetyl-CoA synthase (656 aa)
     
 
  0.511
acsA
acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (631 aa)
     
 
  0.511
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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