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Slin_6370 protein (Spirosoma linguale) - STRING interaction network
"Slin_6370" - Thiamine pyrophosphate domain-containing TPP-binding protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6370Thiamine pyrophosphate domain-containing TPP-binding protein (599 aa)    
Predicted Functional Partners:
Slin_5913
Acetolactate synthase small subunit (177 aa)
 
  0.996
ilvD
Dihydroxy-acid dehydratase (569 aa)
 
 
  0.960
Slin_1829
Dihydroxy-acid dehydratase (568 aa)
 
 
  0.959
Slin_5901
3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (198 aa)
 
 
  0.954
Slin_5897
Pyruvate carboxyltransferase (379 aa)
 
 
  0.953
Slin_2911
Malate dehydrogenase (755 aa)
   
 
  0.949
Slin_4063
Pyruvate kinase (488 aa)
     
  0.942
Slin_5902
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (470 aa)
 
 
  0.933
Slin_3069
Aldehyde dehydrogenase (508 aa)
   
 
  0.922
Slin_2333
Aldehyde dehydrogenase (504 aa)
   
 
  0.922
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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