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Slin_6377 protein (Spirosoma linguale) - STRING interaction network
"Slin_6377" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6377Hypothetical protein (340 aa)    
Predicted Functional Partners:
Slin_6216
40-residue YVTN family beta-propeller repeat-containing protein (911 aa)
   
          0.763
Slin_6217
40-residue YVTN family beta-propeller repeat-containing protein (829 aa)
   
          0.756
Slin_3396
Phosphoesterase (928 aa)
   
          0.688
Slin_6292
PA14 domain-containing protein (1314 aa)
   
          0.648
Slin_6571
Ig family protein (1342 aa)
   
          0.520
Slin_6376
TonB-dependent receptor (920 aa)
              0.520
Slin_5108
Hypothetical protein (387 aa)
   
          0.514
Slin_4243
Hypothetical protein (245 aa)
   
          0.503
Slin_6378
TonB-dependent receptor plug (828 aa)
              0.487
Slin_6227
Hypothetical protein (420 aa)
   
          0.478
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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