STRINGSTRING
Slin_6404 protein (Spirosoma linguale) - STRING interaction network
"Slin_6404" - Group 1 glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6404Group 1 glycosyl transferase (399 aa)    
Predicted Functional Partners:
Slin_6403
Transferase (214 aa)
              0.859
Slin_6405
Group 1 glycosyl transferase (384 aa)
              0.775
Slin_5463
Hypothetical protein (884 aa)
   
          0.728
Slin_6530
RagB/SusD domain-containing protein (521 aa)
   
          0.666
Slin_5097
Hypothetical protein (727 aa)
   
          0.661
Slin_6402
Group 1 glycosyl transferase (401 aa)
              0.646
Slin_6401
Hypothetical protein (384 aa)
              0.646
Slin_2257
Hypothetical protein (831 aa)
   
          0.642
Slin_2543
Hypothetical protein (607 aa)
   
          0.619
Slin_6612
Hypothetical protein (546 aa)
   
          0.617
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (11%) [HD]