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Slin_6412 protein (Spirosoma linguale) - STRING interaction network
"Slin_6412" - WecB/TagA/CpsF family glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6412WecB/TagA/CpsF family glycosyl transferase (260 aa)    
Predicted Functional Partners:
Slin_0719
Group 1 glycosyl transferase (401 aa)
 
          0.687
Slin_2593
Glycosyl transferase family protein (405 aa)
 
 
 
  0.623
Slin_3144
Glycosyl transferase family protein (366 aa)
 
 
 
  0.615
Slin_6307
Capsular exopolysaccharide family protein (772 aa)
   
   
  0.565
Slin_3852
Family 2 glycosyl transferase (321 aa)
            0.561
Slin_4071
UDP-N-acetylglucosamine 2-epimerase (368 aa)
 
     
  0.558
Slin_4935
Polysaccharide biosynthesis protein (442 aa)
 
 
 
  0.544
Slin_0724
Polysaccharide biosynthesis protein (448 aa)
 
 
 
  0.531
Slin_3861
Family 2 glycosyl transferase (397 aa)
 
 
      0.522
Slin_3853
Family 2 glycosyl transferase (396 aa)
 
 
      0.514
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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