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Slin_6417 protein (Spirosoma linguale) - STRING interaction network
"Slin_6417" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6417Hypothetical protein (501 aa)    
Predicted Functional Partners:
Slin_6418
Glycosyl transferase family protein (537 aa)
              0.796
Slin_2543
Hypothetical protein (607 aa)
   
          0.691
Slin_4078
Lipopolysaccharide biosynthesis protein (349 aa)
   
          0.681
Slin_5605
Hypothetical protein (361 aa)
   
          0.678
Slin_5097
Hypothetical protein (727 aa)
   
          0.677
Slin_6188
TonB family protein (804 aa)
   
          0.673
Slin_4936
Lipopolysaccharide biosynthesis protein (362 aa)
   
          0.667
Slin_6611
TonB-dependent receptor plug (1137 aa)
   
          0.657
Slin_4903
Organic solvent tolerance protein OstA-like protein (1210 aa)
   
          0.643
Slin_6612
Hypothetical protein (546 aa)
   
          0.619
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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