STRINGSTRING
Slin_6435 protein (Spirosoma linguale) - STRING interaction network
"Slin_6435" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6435Hypothetical protein (280 aa)    
Predicted Functional Partners:
Slin_6434
Glycoside hydrolase family protein (286 aa)
              0.859
Slin_3395
Hypothetical protein (428 aa)
   
          0.724
Slin_1009
Xylose isomerase (308 aa)
 
          0.714
Slin_4673
Xylose isomerase (341 aa)
 
          0.665
Slin_0965
Heme-binding protein (902 aa)
   
          0.662
Slin_6210
Heme-binding protein (1141 aa)
   
          0.630
Slin_4733
Hypothetical protein (506 aa)
   
          0.598
Slin_4226
Hypothetical protein (417 aa)
   
          0.593
Slin_3039
Hypothetical protein (534 aa)
   
          0.592
Slin_5811
Dehydrogenase (1040 aa)
   
          0.562
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]