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Slin_6438 protein (Spirosoma linguale) - STRING interaction network
"Slin_6438" - Iron-dependent peroxidase-like protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6438Iron-dependent peroxidase-like protein (484 aa)    
Predicted Functional Partners:
Slin_6437
Hypothetical protein (473 aa)
              0.829
Slin_3760
Catalase (362 aa)
 
          0.661
Slin_0897
Radical SAM protein (454 aa)
   
          0.560
Slin_3876
NHL repeat containing protein (379 aa)
   
          0.508
tatC
Sec-independent protein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes (285 aa)
         
  0.457
Slin_6204
TIR protein (260 aa)
   
          0.455
Slin_0239
XisI protein (115 aa)
   
          0.451
Slin_0534
Pyridoxamine 5’-phosphate oxidase-like FMN-binding protein (170 aa)
   
          0.419
Slin_3295
Multi-sensor signal transduction multi-kinase (1774 aa)
 
          0.405
Slin_1546
XisI protein (115 aa)
   
          0.404
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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