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Slin_6446 protein (Spirosoma linguale) - STRING interaction network
"Slin_6446" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6446Hypothetical protein (270 aa)    
Predicted Functional Partners:
Slin_6445
Short-chain dehydrogenase/reductase SDR (272 aa)
              0.861
Slin_6444
Hypothetical protein (140 aa)
              0.787
Slin_6457
Hypothetical protein (143 aa)
 
          0.703
Slin_4634
Hypothetical protein (288 aa)
   
          0.650
Slin_5144
Hypothetical protein (267 aa)
   
          0.614
Slin_4568
PARP catalytic domain-containing protein (446 aa)
   
          0.595
Slin_6443
TetR family transcriptional regulator (202 aa)
              0.571
Slin_5991
Peptidase S8/S53 subtilisin kexin sedolisin (1343 aa)
   
          0.568
Slin_4115
Hypothetical protein (2278 aa)
   
          0.560
Slin_2397
Hypothetical protein (571 aa)
   
          0.531
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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