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Slin_6466 protein (Spirosoma linguale) - STRING interaction network
"Slin_6466" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6466Hypothetical protein (346 aa)    
Predicted Functional Partners:
Slin_6467
Peptidase C14 caspase catalytic subunit p20 (511 aa)
              0.859
Slin_6468
Hypothetical protein (495 aa)
              0.805
Slin_6465
Hypothetical protein (400 aa)
              0.792
Slin_6464
Hypothetical protein (196 aa)
              0.774
Slin_6470
Hypothetical protein (419 aa)
              0.681
Slin_6469
Peptidase M48 Ste24p (573 aa)
              0.681
Slin_6471
Sel1 domain-containing protein repeat-containing protein (1274 aa)
              0.644
Slin_6463
Hypothetical protein (70 aa)
              0.593
Slin_6462
Hypothetical protein (409 aa)
              0.547
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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