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Slin_6498 protein (Spirosoma linguale) - STRING interaction network
"Slin_6498" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6498Hypothetical protein (835 aa)    
Predicted Functional Partners:
Slin_6499
ABC transporter (230 aa)
 
   
  0.941
Slin_6500
G-D-S-L family lipolytic protein (237 aa)
 
        0.919
Slin_0089
Hypothetical protein (223 aa)
   
          0.636
Slin_5073
Hypothetical protein (483 aa)
   
          0.511
Slin_5445
FG-GAP repeat-containing protein (1203 aa)
   
          0.499
Slin_6497
Thiopurine S-methyltransferase (228 aa)
              0.490
Slin_5060
ASPIC/UnbV domain-containing protein (1161 aa)
   
          0.484
Slin_5057
ASPIC/UnbV domain-containing protein (1166 aa)
   
          0.469
Slin_5653
FG-GAP repeat-containing protein (1208 aa)
   
          0.466
Slin_5056
ASPIC/UnbV domain-containing protein (1113 aa)
   
          0.464
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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