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Slin_6518 protein (Spirosoma linguale) - STRING interaction network
"Slin_6518" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6518Hypothetical protein (309 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (435 aa)
 
          0.871
Slin_4754
Hypothetical protein (257 aa)
   
          0.778
Slin_1309
Hypothetical protein (614 aa)
   
          0.778
Slin_3227
Uroporphyrinogen III synthase HEM4 (261 aa)
   
          0.776
Slin_2316
Hypothetical protein (179 aa)
   
          0.770
Slin_1306
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (103 aa)
   
          0.766
Slin_4064
Hypothetical protein (180 aa)
   
          0.763
Slin_3080
Hypothetical protein (1564 aa)
   
          0.762
Slin_2038
Hypothetical protein (1024 aa)
   
          0.758
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (88 aa)
   
          0.758
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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