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Slin_6521 protein (Spirosoma linguale) - STRING interaction network
"Slin_6521" - Carboxyl-terminal protease in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6521Carboxyl-terminal protease (709 aa)    
Predicted Functional Partners:
Slin_6522
Peptidyl-prolyl isomerase (258 aa)
 
        0.674
Slin_6520
Hypothetical protein (79 aa)
              0.606
Slin_5152
Protease Do (506 aa)
 
   
  0.585
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (1130 aa)
 
   
  0.582
Slin_1209
Peptidase S1 and S6 chymotrypsin/Hap (337 aa)
 
   
  0.563
Slin_0786
Hypothetical protein (293 aa)
 
 
      0.555
Slin_1594
Hypothetical protein (222 aa)
 
          0.553
Slin_2087
DNA/RNA non-specific endonuclease (724 aa)
   
   
  0.545
Slin_2676
HtrA2 peptidase (351 aa)
   
   
  0.530
Slin_1779
Peptidase M23 (354 aa)
   
 
  0.514
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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