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Slin_6525 protein (Spirosoma linguale) - STRING interaction network
"Slin_6525" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6525Hypothetical protein (189 aa)    
Predicted Functional Partners:
Slin_0498
Lipoprotein (187 aa)
   
          0.759
Slin_6526
Hypothetical protein (96 aa)
              0.595
Slin_3472
Hypothetical protein (177 aa)
   
          0.557
Slin_1834
Peptidase M16 domain-containing protein (934 aa)
 
          0.553
Slin_1835
Peptidase M16 domain-containing protein (949 aa)
 
          0.507
Slin_0364
Hypothetical protein (683 aa)
   
          0.507
Slin_4984
Phospholipid/glycerol acyltransferase (251 aa)
   
          0.505
atpG
ATP synthase F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex (297 aa)
              0.463
Slin_4452
Hypothetical protein (113 aa)
   
          0.421
Slin_5791
Peptidase M16 domain-containing protein (447 aa)
 
          0.406
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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