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Slin_6532 protein (Spirosoma linguale) - STRING interaction network
"Slin_6532" - Mannan endo-1,4-beta-mannosidase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6532Mannan endo-1,4-beta-mannosidase (584 aa)    
Predicted Functional Partners:
Slin_3032
Mannan endo-1,4-beta-mannosidase (385 aa)
 
   
 
0.861
Slin_0271
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) (402 aa)
 
     
  0.841
Slin_3183
PfkB domain-containing protein (297 aa)
         
    0.800
Slin_1088
PfkB domain-containing protein (315 aa)
         
    0.800
Slin_6381
N-acylglucosamine 2-epimerase (427 aa)
 
     
  0.767
Slin_6460
Arabinogalactan endo-1,4-beta-galactosidase (347 aa)
   
     
  0.682
Slin_1420
Glycoside hydrolase family protein (530 aa)
   
          0.616
Slin_1719
Glycoside hydrolase family protein (922 aa)
   
          0.602
Slin_6407
Endo-1,4-beta-xylanase (387 aa)
   
     
  0.573
Slin_0768
Glycosidase PH1107-like protein (357 aa)
 
     
  0.570
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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