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Slin_6535 protein (Spirosoma linguale) - STRING interaction network
"Slin_6535" - TonB-dependent receptor in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6535TonB-dependent receptor (694 aa)    
Predicted Functional Partners:
Slin_6538
Hypothetical protein (210 aa)
 
          0.934
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (565 aa)
       
      0.884
Slin_6534
Hypothetical protein (309 aa)
 
          0.748
Slin_4375
Esterase (288 aa)
 
   
  0.687
Slin_6536
Hypothetical protein (126 aa)
              0.686
Slin_6537
Hypothetical protein (68 aa)
              0.664
Slin_2076
Hypothetical protein (1074 aa)
   
          0.657
Slin_5938
MotA/TolQ/ExbB proton channel (236 aa)
 
 
  0.650
Slin_4527
Esterase (358 aa)
   
   
  0.630
Slin_2144
Esterase (400 aa)
   
   
  0.630
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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