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Slin_6539 protein (Spirosoma linguale) - STRING interaction network
"Slin_6539" - Ferritin Dps family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6539Ferritin Dps family protein; Iron-storage protein (176 aa)    
Predicted Functional Partners:
Slin_6540
Hypothetical protein (120 aa)
              0.596
dnaK
Chaperone protein DnaK; Acts as a chaperone (644 aa)
   
  0.535
Slin_5724
TIR protein (942 aa)
   
  0.526
Slin_1429
DnaK-type molecular chaperone DnaK (428 aa)
   
  0.526
Slin_6133
Peptidase M28 (461 aa)
     
    0.510
Slin_6549
Peptidase M28 (551 aa)
       
    0.504
Slin_6038
Peptidase M28 (454 aa)
       
    0.504
Slin_5214
Peptidase M28 (531 aa)
       
    0.504
Slin_4866
Peptidase M28 (539 aa)
       
    0.504
Slin_4736
Peptidase M28 (497 aa)
       
    0.504
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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