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Slin_6544 protein (Spirosoma linguale) - STRING interaction network
"Slin_6544" - Class I and II aminotransferase in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
Slin_6544Class I and II aminotransferase (403 aa)    
Predicted Functional Partners:
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (257 aa)
       
  0.956
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (244 aa)
   
 
  0.947
Slin_1999
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (271 aa)
   
 
  0.945
Slin_4514
Aspartate kinase (818 aa)
   
 
  0.834
Slin_6542
Prephenate dehydrogenase (285 aa)
 
     
  0.752
Slin_2319
Glutamate synthase (1524 aa)
   
 
  0.751
Slin_2566
Chorismate mutase (357 aa)
 
   
  0.723
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (337 aa)
 
 
  0.609
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (424 aa)
 
   
  0.589
Slin_5432
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (273 aa)
   
  0.551
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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