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Slin_6551 protein (Spirosoma linguale) - STRING interaction network
"Slin_6551" - RND family efflux transporter MFP subunit in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6551RND family efflux transporter MFP subunit (319 aa)    
Predicted Functional Partners:
Slin_6550
Outer membrane efflux protein (433 aa)
 
          0.962
Slin_6552
CzcA family heavy metal efflux pump (1060 aa)
 
          0.895
Slin_2928
CzcA family heavy metal efflux pump (1032 aa)
 
          0.695
Slin_2549
CzcA family heavy metal efflux pump (1046 aa)
 
          0.688
Slin_4493
RND family efflux transporter MFP subunit (367 aa)
   
          0.685
Slin_4058
CzcA family heavy metal efflux pump (1037 aa)
 
          0.684
Slin_0917
CzcA family heavy metal efflux pump (1043 aa)
 
          0.680
Slin_1021
RND family efflux transporter MFP subunit (390 aa)
   
          0.637
Slin_2551
Outer membrane efflux protein (422 aa)
 
          0.620
Slin_3177
CzcA family heavy metal efflux pump (1462 aa)
 
          0.609
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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