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Slin_6571 protein (Spirosoma linguale) - STRING interaction network
"Slin_6571" - Ig family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6571Ig family protein (1342 aa)    
Predicted Functional Partners:
Slin_6227
Hypothetical protein (420 aa)
   
          0.735
Slin_0838
Glyoxalase/bleomycin resistance protein/dioxygenase (128 aa)
   
          0.732
Slin_3008
Hypothetical protein (419 aa)
   
          0.721
Slin_2597
UTP--glucose-1-phosphate uridylyltransferase (1119 aa)
   
          0.707
Slin_4243
Hypothetical protein (245 aa)
   
          0.699
Slin_5991
Peptidase S8/S53 subtilisin kexin sedolisin (1343 aa)
   
          0.651
Slin_4634
Hypothetical protein (288 aa)
   
          0.635
Slin_5144
Hypothetical protein (267 aa)
   
          0.634
Slin_6216
40-residue YVTN family beta-propeller repeat-containing protein (911 aa)
   
          0.617
Slin_3868
CRISPR-associated protein TM1801 (307 aa)
   
          0.612
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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